Aug 11 11:43:48.760 INFO checking heme-0.3.1 against master#f6d43ed84207c7e58f363f46e5a438ff40f2b311 for libc-1
Aug 11 11:43:48.760 INFO running: cargo +f6d43ed84207c7e58f363f46e5a438ff40f2b311-alt check --frozen --all --all-targets
Aug 11 11:43:48.760 INFO creating container for: cargo +f6d43ed84207c7e58f363f46e5a438ff40f2b311-alt check --frozen --all --all-targets
Aug 11 11:43:48.760 INFO running `"docker" "create" "-v" "/tmp/crater.3QnQJ1aop1KE:/source:ro,Z" "-v" "/home/ec2-user/crater/./work/local/target-dirs/libc-1/worker-4/master#f6d43ed84207c7e58f363f46e5a438ff40f2b311:/target:rw,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-v" "/home/ec2-user/crater/./work/local/cargo-home/git:/cargo-home/git:rw,Z" "-e" "USER_ID=500" "-e" "CMD=cargo +f6d43ed84207c7e58f363f46e5a438ff40f2b311-alt check --frozen --all --all-targets" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "crater"`
Aug 11 11:43:49.083 INFO blam! b423fce0abc0192387de222f07f3190889df21b421ed744be1e974e6d462fdd1
Aug 11 11:43:49.085 INFO running `"docker" "start" "-a" "b423fce0abc0192387de222f07f3190889df21b421ed744be1e974e6d462fdd1"`
Aug 11 11:43:50.677 INFO kablam!     Checking heme v0.3.1 (file:///source)
Aug 11 11:43:51.140 INFO kablam! warning: unused import: `std::collections::HashMap`
Aug 11 11:43:51.140 INFO kablam!  --> src/sampling.rs:1:5
Aug 11 11:43:51.140 INFO kablam!   |
Aug 11 11:43:51.140 INFO kablam! 1 | use std::collections::HashMap; 
Aug 11 11:43:51.140 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.140 INFO kablam!   |
Aug 11 11:43:51.140 INFO kablam!   = note: #[warn(unused_imports)] on by default
Aug 11 11:43:51.140 INFO kablam! 
Aug 11 11:43:51.385 INFO kablam! warning: unused import: `std::collections::HashMap`
Aug 11 11:43:51.385 INFO kablam!  --> src/sampling.rs:1:5
Aug 11 11:43:51.385 INFO kablam!   |
Aug 11 11:43:51.385 INFO kablam! 1 | use std::collections::HashMap; 
Aug 11 11:43:51.385 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.386 INFO kablam!   |
Aug 11 11:43:51.386 INFO kablam!   = note: #[warn(unused_imports)] on by default
Aug 11 11:43:51.386 INFO kablam! 
Aug 11 11:43:51.441 INFO kablam! warning: unused variable: `protocol_name`
Aug 11 11:43:51.441 INFO kablam!   --> src/sampling.rs:20:21
Aug 11 11:43:51.441 INFO kablam!    |
Aug 11 11:43:51.441 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Aug 11 11:43:51.442 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Aug 11 11:43:51.442 INFO kablam!    |
Aug 11 11:43:51.442 INFO kablam!    = note: #[warn(unused_variables)] on by default
Aug 11 11:43:51.442 INFO kablam! 
Aug 11 11:43:51.442 INFO kablam! warning: unused variable: `a1`
Aug 11 11:43:51.442 INFO kablam!   --> src/scoring.rs:24:39
Aug 11 11:43:51.442 INFO kablam!    |
Aug 11 11:43:51.442 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Aug 11 11:43:51.442 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Aug 11 11:43:51.442 INFO kablam! 
Aug 11 11:43:51.442 INFO kablam! warning: unused variable: `a2`
Aug 11 11:43:51.442 INFO kablam!   --> src/scoring.rs:24:50
Aug 11 11:43:51.442 INFO kablam!    |
Aug 11 11:43:51.442 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Aug 11 11:43:51.442 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Aug 11 11:43:51.442 INFO kablam! 
Aug 11 11:43:51.510 INFO kablam! warning: field is never used: `atoms`
Aug 11 11:43:51.510 INFO kablam!   --> src/conformation.rs:52:5
Aug 11 11:43:51.510 INFO kablam!    |
Aug 11 11:43:51.510 INFO kablam! 52 |     atoms: Vec<Atom>,
Aug 11 11:43:51.510 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Aug 11 11:43:51.511 INFO kablam!    |
Aug 11 11:43:51.511 INFO kablam!    = note: #[warn(dead_code)] on by default
Aug 11 11:43:51.511 INFO kablam! 
Aug 11 11:43:51.512 INFO kablam! warning: field is never used: `residue_name`
Aug 11 11:43:51.512 INFO kablam!   --> src/conformation.rs:53:5
Aug 11 11:43:51.512 INFO kablam!    |
Aug 11 11:43:51.512 INFO kablam! 53 |     residue_name: String,
Aug 11 11:43:51.512 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.512 INFO kablam! 
Aug 11 11:43:51.513 INFO kablam! warning: field is never used: `residue_index`
Aug 11 11:43:51.513 INFO kablam!   --> src/conformation.rs:54:5
Aug 11 11:43:51.513 INFO kablam!    |
Aug 11 11:43:51.513 INFO kablam! 54 |     residue_index: i32,
Aug 11 11:43:51.513 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.513 INFO kablam! 
Aug 11 11:43:51.572 INFO kablam! warning: unused variable: `protocol_name`
Aug 11 11:43:51.572 INFO kablam!   --> src/sampling.rs:20:21
Aug 11 11:43:51.572 INFO kablam!    |
Aug 11 11:43:51.572 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Aug 11 11:43:51.572 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Aug 11 11:43:51.572 INFO kablam!    |
Aug 11 11:43:51.572 INFO kablam!    = note: #[warn(unused_variables)] on by default
Aug 11 11:43:51.573 INFO kablam! 
Aug 11 11:43:51.573 INFO kablam! warning: unused variable: `a1`
Aug 11 11:43:51.573 INFO kablam!   --> src/scoring.rs:24:39
Aug 11 11:43:51.573 INFO kablam!    |
Aug 11 11:43:51.573 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Aug 11 11:43:51.573 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Aug 11 11:43:51.574 INFO kablam! 
Aug 11 11:43:51.574 INFO kablam! warning: unused variable: `a2`
Aug 11 11:43:51.575 INFO kablam!   --> src/scoring.rs:24:50
Aug 11 11:43:51.575 INFO kablam!    |
Aug 11 11:43:51.575 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Aug 11 11:43:51.575 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Aug 11 11:43:51.575 INFO kablam! 
Aug 11 11:43:51.635 INFO kablam! warning: field is never used: `atoms`
Aug 11 11:43:51.635 INFO kablam!   --> src/conformation.rs:52:5
Aug 11 11:43:51.635 INFO kablam!    |
Aug 11 11:43:51.635 INFO kablam! 52 |     atoms: Vec<Atom>,
Aug 11 11:43:51.635 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Aug 11 11:43:51.635 INFO kablam!    |
Aug 11 11:43:51.635 INFO kablam!    = note: #[warn(dead_code)] on by default
Aug 11 11:43:51.635 INFO kablam! 
Aug 11 11:43:51.635 INFO kablam! warning: field is never used: `residue_name`
Aug 11 11:43:51.635 INFO kablam!   --> src/conformation.rs:53:5
Aug 11 11:43:51.635 INFO kablam!    |
Aug 11 11:43:51.635 INFO kablam! 53 |     residue_name: String,
Aug 11 11:43:51.635 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.636 INFO kablam! 
Aug 11 11:43:51.636 INFO kablam! warning: field is never used: `residue_index`
Aug 11 11:43:51.636 INFO kablam!   --> src/conformation.rs:54:5
Aug 11 11:43:51.636 INFO kablam!    |
Aug 11 11:43:51.636 INFO kablam! 54 |     residue_index: i32,
Aug 11 11:43:51.636 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Aug 11 11:43:51.636 INFO kablam! 
Aug 11 11:43:51.653 INFO kablam! warning: function `H` should have a snake case name such as `h`
Aug 11 11:43:51.653 INFO kablam!    --> src/io.rs:152:9
Aug 11 11:43:51.653 INFO kablam!     |
Aug 11 11:43:51.653 INFO kablam! 152 | /         fn H(l: &f64) -> f64 {
Aug 11 11:43:51.653 INFO kablam! 153 | |
Aug 11 11:43:51.653 INFO kablam! 154 | |             // bounds of N choose lN
Aug 11 11:43:51.653 INFO kablam! 155 | |             // can be found by 2^(n*H(l))
Aug 11 11:43:51.653 INFO kablam! ...   |
Aug 11 11:43:51.653 INFO kablam! 161 | |             l.ln() - value * value.ln()
Aug 11 11:43:51.653 INFO kablam! 162 | |         }
Aug 11 11:43:51.653 INFO kablam!     | |_________^
Aug 11 11:43:51.654 INFO kablam!     |
Aug 11 11:43:51.654 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Aug 11 11:43:51.654 INFO kablam! 
Aug 11 11:43:52.690 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 2.05s
Aug 11 11:43:52.693 INFO kablam! su: No module specific data is present
Aug 11 11:43:53.424 INFO running `"docker" "rm" "-f" "b423fce0abc0192387de222f07f3190889df21b421ed744be1e974e6d462fdd1"`
Aug 11 11:43:53.603 INFO blam! b423fce0abc0192387de222f07f3190889df21b421ed744be1e974e6d462fdd1